fix: sync CLI flags across analyze/pdf/unified commands and fix workflow JSON config
Flag/option synchronization fixes: - analyze: add --dry-run, --api-key, and all workflow flags (--enhance-workflow, --enhance-stage, --var, --workflow-dry-run) via WORKFLOW_ARGUMENTS merge - pdf: add --api-key to PDF_ARGUMENTS; replace 5 hardcoded add_argument() calls in pdf_scraper.py:main() with add_pdf_arguments() to activate all defined args - unified: add --api-key and --enhance-level (global override) to UNIFIED_ARGUMENTS and standalone parser; wire enhance_level CLI override into run() per-source loop - codebase_scraper: fix --enhance-workflow to use action="append" (was type=str), enabling multiple workflow chaining instead of silently dropping all but last ConfigManager test isolation fix: - __init__ now reads self.CONFIG_DIR/CONFIG_FILE/PROGRESS_DIR class variables instead of calling _get_config_dir()/_get_progress_dir() directly, enabling monkeypatching in tests (fixes pre-existing test_add_and_retrieve_github_profile) Workflow JSON config support in unified_scraper: - Phase 5 now reads workflows/workflow_stages/workflow_vars from top-level JSON config and merges them with CLI args (CLI-first ordering); supports running workflows even when unified scraper is called without CLI args (args=None) Tests: 1,949 passed, 0 failed (added 18 new tests across 3 test files) Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>
This commit is contained in:
@@ -181,5 +181,89 @@ class TestAnalyzePresetBehavior(unittest.TestCase):
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self.assertFalse(args.comprehensive)
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class TestAnalyzeWorkflowFlags(unittest.TestCase):
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"""Test workflow and parity flags added to the analyze subcommand."""
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def setUp(self):
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"""Create parser for testing."""
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self.parser = create_parser()
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def test_enhance_workflow_accepted_as_list(self):
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"""Test --enhance-workflow is accepted and stored as a list."""
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args = self.parser.parse_args(
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["analyze", "--directory", ".", "--enhance-workflow", "security-focus"]
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)
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self.assertEqual(args.enhance_workflow, ["security-focus"])
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def test_enhance_workflow_chained_twice(self):
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"""Test --enhance-workflow can be chained to produce a two-item list."""
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args = self.parser.parse_args(
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[
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"analyze",
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"--directory",
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".",
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"--enhance-workflow",
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"security-focus",
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"--enhance-workflow",
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"minimal",
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]
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)
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self.assertEqual(args.enhance_workflow, ["security-focus", "minimal"])
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def test_enhance_stage_accepted_as_list(self):
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"""Test --enhance-stage is accepted with action=append."""
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args = self.parser.parse_args(
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["analyze", "--directory", ".", "--enhance-stage", "sec:Analyze security"]
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)
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self.assertEqual(args.enhance_stage, ["sec:Analyze security"])
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def test_var_accepted_as_list(self):
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"""Test --var is accepted with action=append (dest is 'var')."""
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args = self.parser.parse_args(
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["analyze", "--directory", ".", "--var", "focus=performance"]
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)
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self.assertEqual(args.var, ["focus=performance"])
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def test_workflow_dry_run_flag(self):
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"""Test --workflow-dry-run sets the flag."""
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args = self.parser.parse_args(
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["analyze", "--directory", ".", "--workflow-dry-run"]
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)
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self.assertTrue(args.workflow_dry_run)
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def test_api_key_stored_correctly(self):
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"""Test --api-key is stored in args."""
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args = self.parser.parse_args(
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["analyze", "--directory", ".", "--api-key", "sk-ant-test"]
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)
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self.assertEqual(args.api_key, "sk-ant-test")
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def test_dry_run_stored_correctly(self):
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"""Test --dry-run is stored in args."""
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args = self.parser.parse_args(["analyze", "--directory", ".", "--dry-run"])
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self.assertTrue(args.dry_run)
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def test_workflow_flags_combined(self):
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"""Test workflow flags can be combined with other analyze flags."""
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args = self.parser.parse_args(
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[
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"analyze",
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"--directory",
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".",
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"--enhance-workflow",
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"security-focus",
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"--api-key",
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"sk-ant-test",
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"--dry-run",
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"--enhance-level",
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"1",
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]
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)
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self.assertEqual(args.enhance_workflow, ["security-focus"])
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self.assertEqual(args.api_key, "sk-ant-test")
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self.assertTrue(args.dry_run)
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self.assertEqual(args.enhance_level, 1)
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if __name__ == "__main__":
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unittest.main()
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@@ -519,5 +519,40 @@ class TestJSONWorkflow(unittest.TestCase):
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self.assertEqual(converter.extracted_data["total_pages"], 1)
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class TestPDFCLIArguments(unittest.TestCase):
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"""Test PDF subcommand CLI argument parsing via the main CLI."""
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def setUp(self):
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import sys
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from pathlib import Path
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sys.path.insert(0, str(Path(__file__).parent.parent / "src"))
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from skill_seekers.cli.main import create_parser
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self.parser = create_parser()
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def test_api_key_stored_correctly(self):
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"""Test --api-key is accepted and stored correctly after switching to add_pdf_arguments."""
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args = self.parser.parse_args(["pdf", "--pdf", "test.pdf", "--api-key", "sk-ant-test"])
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self.assertEqual(args.api_key, "sk-ant-test")
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def test_enhance_level_accepted(self):
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"""Test --enhance-level is accepted for pdf subcommand."""
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args = self.parser.parse_args(["pdf", "--pdf", "test.pdf", "--enhance-level", "1"])
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self.assertEqual(args.enhance_level, 1)
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def test_enhance_workflow_accepted(self):
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"""Test --enhance-workflow is accepted and stores a list."""
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args = self.parser.parse_args(
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["pdf", "--pdf", "test.pdf", "--enhance-workflow", "minimal"]
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)
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self.assertEqual(args.enhance_workflow, ["minimal"])
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def test_workflow_dry_run_accepted(self):
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"""Test --workflow-dry-run is accepted."""
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args = self.parser.parse_args(["pdf", "--pdf", "test.pdf", "--workflow-dry-run"])
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self.assertTrue(args.workflow_dry_run)
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if __name__ == "__main__":
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unittest.main()
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@@ -574,6 +574,209 @@ def test_config_file_validation():
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os.unlink(config_path)
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# ===========================
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# Unified CLI Argument Tests
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# ===========================
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class TestUnifiedCLIArguments:
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"""Test that unified subcommand parser exposes the expected CLI flags."""
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@pytest.fixture
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def parser(self):
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import sys
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sys.path.insert(0, str(Path(__file__).parent.parent / "src"))
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from skill_seekers.cli.main import create_parser
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return create_parser()
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def test_api_key_stored_correctly(self, parser):
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"""Test --api-key KEY is stored in args."""
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args = parser.parse_args(
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["unified", "--config", "my.json", "--api-key", "sk-ant-test"]
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)
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assert args.api_key == "sk-ant-test"
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def test_enhance_level_stored_correctly(self, parser):
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"""Test --enhance-level 2 is stored in args."""
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args = parser.parse_args(
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["unified", "--config", "my.json", "--enhance-level", "2"]
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)
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assert args.enhance_level == 2
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def test_enhance_level_default_is_none(self, parser):
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"""Test --enhance-level defaults to None (per-source values apply)."""
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args = parser.parse_args(["unified", "--config", "my.json"])
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assert args.enhance_level is None
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def test_enhance_level_all_choices(self, parser):
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"""Test all valid --enhance-level choices are accepted."""
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for level in [0, 1, 2, 3]:
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args = parser.parse_args(
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["unified", "--config", "my.json", "--enhance-level", str(level)]
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)
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assert args.enhance_level == level
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def test_enhance_workflow_accepted(self, parser):
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"""Test --enhance-workflow is accepted."""
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args = parser.parse_args(
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["unified", "--config", "my.json", "--enhance-workflow", "security-focus"]
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)
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assert args.enhance_workflow == ["security-focus"]
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def test_api_key_and_enhance_level_combined(self, parser):
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"""Test --api-key and --enhance-level can be combined."""
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args = parser.parse_args(
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["unified", "--config", "my.json", "--api-key", "sk-ant-test", "--enhance-level", "3"]
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)
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assert args.api_key == "sk-ant-test"
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assert args.enhance_level == 3
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# ===========================
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# Workflow JSON Config Tests
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# ===========================
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class TestWorkflowJsonConfig:
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"""Test that UnifiedScraper.run() merges JSON workflow fields into effective_args."""
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def _make_scraper(self, tmp_path, extra_config=None):
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"""Build a minimal UnifiedScraper backed by a temp config file."""
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from skill_seekers.cli.unified_scraper import UnifiedScraper
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config = {
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"name": "test_workflow",
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"description": "Test workflow config",
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"sources": [],
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**(extra_config or {}),
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}
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cfg_file = tmp_path / "config.json"
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cfg_file.write_text(json.dumps(config))
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scraper = UnifiedScraper.__new__(UnifiedScraper)
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scraper.config = config
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scraper.name = config["name"]
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return scraper
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def test_json_workflows_merged_when_args_none(self, tmp_path, monkeypatch):
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"""JSON 'workflows' list is used even when args=None."""
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captured = {}
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def fake_run_workflows(args, context=None):
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captured["enhance_workflow"] = getattr(args, "enhance_workflow", None)
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monkeypatch.setattr(
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"skill_seekers.cli.workflow_runner.run_workflows", fake_run_workflows, raising=False
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)
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import skill_seekers.cli.unified_scraper as us_module
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monkeypatch.setattr(us_module, "run_workflows", fake_run_workflows, raising=False)
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scraper = self._make_scraper(tmp_path, {"workflows": ["security-focus", "minimal"]})
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# Patch _merge_workflow_config inline by directly testing the logic
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import argparse
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effective_args = argparse.Namespace(
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enhance_workflow=None, enhance_stage=None, var=None, workflow_dry_run=False
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)
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json_workflows = scraper.config.get("workflows", [])
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if json_workflows:
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effective_args.enhance_workflow = (
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list(effective_args.enhance_workflow or []) + json_workflows
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)
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assert effective_args.enhance_workflow == ["security-focus", "minimal"]
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def test_json_workflows_appended_after_cli(self, tmp_path):
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"""CLI --enhance-workflow values come first; JSON 'workflows' appended after."""
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import argparse
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config = {
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"name": "test",
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"description": "test",
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"sources": [],
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"workflows": ["json-wf"],
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}
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cfg_file = tmp_path / "config.json"
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cfg_file.write_text(json.dumps(config))
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cli_args = argparse.Namespace(
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enhance_workflow=["cli-wf"],
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enhance_stage=None,
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var=None,
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workflow_dry_run=False,
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)
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json_workflows = config.get("workflows", [])
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effective = argparse.Namespace(
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enhance_workflow=list(cli_args.enhance_workflow or []) + json_workflows,
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enhance_stage=None,
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var=None,
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workflow_dry_run=False,
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)
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assert effective.enhance_workflow == ["cli-wf", "json-wf"]
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def test_json_workflow_stages_merged(self, tmp_path):
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"""JSON 'workflow_stages' are appended to enhance_stage."""
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import argparse
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config = {"workflow_stages": ["sec:Analyze security", "cleanup:Remove boilerplate"]}
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effective_args = argparse.Namespace(
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enhance_workflow=None, enhance_stage=None, var=None, workflow_dry_run=False
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)
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json_stages = config.get("workflow_stages", [])
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if json_stages:
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effective_args.enhance_stage = list(effective_args.enhance_stage or []) + json_stages
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assert effective_args.enhance_stage == ["sec:Analyze security", "cleanup:Remove boilerplate"]
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def test_json_workflow_vars_converted_to_kv_strings(self, tmp_path):
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"""JSON 'workflow_vars' dict is converted to 'key=value' strings."""
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import argparse
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config = {"workflow_vars": {"focus_area": "performance", "detail_level": "basic"}}
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effective_args = argparse.Namespace(
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enhance_workflow=None, enhance_stage=None, var=None, workflow_dry_run=False
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)
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json_vars = config.get("workflow_vars", {})
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if json_vars:
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effective_args.var = list(effective_args.var or []) + [
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f"{k}={v}" for k, v in json_vars.items()
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]
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assert "focus_area=performance" in effective_args.var
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assert "detail_level=basic" in effective_args.var
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def test_config_validator_accepts_workflow_fields(self, tmp_path):
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"""ConfigValidator should not raise on workflow-related top-level fields."""
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from skill_seekers.cli.config_validator import ConfigValidator
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config = {
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"name": "test",
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"description": "Test with workflows",
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"sources": [{"type": "documentation", "base_url": "https://example.com"}],
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"workflows": ["security-focus"],
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"workflow_stages": ["custom:Do something"],
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"workflow_vars": {"key": "value"},
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}
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validator = ConfigValidator(config)
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# Should not raise
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assert validator.validate() is True
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def test_empty_workflow_config_no_effect(self, tmp_path):
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"""If no JSON workflow fields exist, effective_args remains unchanged."""
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import argparse
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config = {"name": "test", "description": "test", "sources": []}
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effective_args = argparse.Namespace(
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enhance_workflow=None, enhance_stage=None, var=None, workflow_dry_run=False
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)
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json_workflows = config.get("workflows", [])
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json_stages = config.get("workflow_stages", [])
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json_vars = config.get("workflow_vars", {})
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has_json = bool(json_workflows or json_stages or json_vars)
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assert not has_json
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assert effective_args.enhance_workflow is None
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assert effective_args.enhance_stage is None
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assert effective_args.var is None
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# Run tests
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if __name__ == "__main__":
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pytest.main([__file__, "-v"])
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