Merge pull request #249 from MiaoDX-fork-and-pruning/dongxu/feat/bootstrap-it-01

Merge PR #249: Bootstrap skill with fixes and MCP optionality

Merged with comprehensive enhancements and testing.

Key Features:
- Bootstrap skill: Self-documentation capability
- MCP optionality: User choice for installation
- Interactive setup wizard
- 6 E2E tests (all passing)
- 1207/1217 tests passing (99.2%)

Co-Authored-By: MiaoDX <MiaoDX@hotmail.com>
Co-Authored-By: Claude Sonnet 4.5 <noreply@anthropic.com>

src/skill_seekers/cli/codebase_scraper.py

@@ -1190,7 +1190,7 @@ Examples:
         print(f"{'='*60}")
         print(f"Files analyzed: {len(results['files'])}")
         print(f"Output directory: {args.output}")
-        if args.build_api_reference:
+        if not args.skip_api_reference:
             print(f"API reference: {Path(args.output) / 'api_reference'}")
         print(f"{'='*60}\n")